Last Modified
1 January 2024
Tutorials
Logical Ligand Design
A New Drug Design Methodology for Organic Chemists (Japanese Language)
Program: Homology Modeling Professional for HyperChem Revision A3 andDocking Study with HyperChem Revision A3, Sep 2006
Design of Human Retinoid X Receptor Agonists 5 pictures
Program: Homology Modeling Professional for HyperChem Revision B1 and Docking Study with HyperChem Revision A3, Nov 2005
Design of Human Retinoid X Receptor Antagonists 6 pictures
Program: Homology Modeling Professional for HyperChem Revision B1 and Docking Study with HyperChem Revision A3, Nov 2005
Reaction Coordinate Analysis for Protein-Ligand Complex Formation
Program: Homology Modeling for HyperChem Revision A3, 2005
Docking Simulation
Docking Study of Human Retinoic Acid Receptor-g LBD with All-trans Retinoic Acid
Program: Docking Study with HyperChem Revision F3, Nov 2014
Virtual Screenings for Human Retinoid X Receptor-a (hRXRa)/Human PPARg Ligand Binding Domain Heterodimer with 20 Synthetic Compounds via AutoDock Vina In Silico Screenings Interface
Program: Docking Study with HyperChem Revision H1, Jan, 2019
Homology Modeling
Homology Modeling of Human Rhodopsin 20 pictures
Program: Homology Modeling Professional for HyperChem Revision B1, 2007
Template molecule: bovine rhodopsin
Contains cell membrane components.
Contains heavy metal atoms.
Contains the retinal Schiff base and covalent bonds with sugars.
Homology Modeling of Human Androgen Receptor DNA Binding Domain 14 pictures
Program: Homology Modeling Professional for HyperChem Revision B1, 2007
Template molecule: human glucocorticoid receptor DNA binding domain
Contains zinc atoms of zinc finger motifs.
Forms a complex with double-strand DNA response elements.
Forms a dimer structure.
Homology Modeling of Human Mineralocorticoid Ligand Binding Domain 16 pictures
Program: Homology Modeling Professional for HyperChem Revision B1, 2007
Template molecule: human glucocorticoid receptor ligand binding domain
Contains a cofactor fragment.
Forms a complex with agonist, dexamethasone.
Structural Refinement
Preparation of a Retinal Schiff base in the Human Rhodopsin Model 21 pictures
Program: Homology Modeling for HyperChem Revision A3, 2006
Structure-based Drug Design System
