Institute of Molecular Function

 

         

   Japanese

 Introduces a new logical drug design methodology for organic chemists.

 The protein- and ligand-flexible docking simulation program, Docking Study with HyperChem

 Free software, Molecular Modeling Tools for HyperChem

   Last Modified

   7 Sep 2007

Click on the individual program names to access to their detailed features.

Homology Modeling for HyperChem

 

Protein Superposition

 

Feature

The "Protein Superposition" program (RMS fit) can automatically superpose merged target molecules (system B) onto the reference molecules (system A) currently loaded into the HyperChem workspace. A molecule system B (and other molecule systems C, D, ...) can be repeatedly superposed onto a desired molecule in the HyperChem workspace (Stacking function) as well as can be unmerged. This program can be used for extraction of important elements from a template molecule system and for constructing a chimera model, as well as used for many structural informatics such as a structural classification of proteins and an analysis of induced fit effect.

 

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