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Last Modified 7 Sep 2007 |
Bioinformatics
The "ab initio 3D modeling" is now in development, based on the high precision of our secondary structure prediction algorithm. The predicted structures well reproduced the corresponding crystal structures (refer to the results of the protein superposition). In particular, our algorithm precisely predicted both a loop structure and a random coil structure. Consequently, the secondary structure parts (helices and sheets) are coordinated to a suitable orientation, thus giving a well-reproduced whole structure.
Secondary Structure Prediction Novel secondary structure prediction algorithm is based on only the f and y values of main chain atoms. This algorithm shows the high precision in the known algorithms (e.g., Chou-Fasman and neural network algorithms, etc.).
The ab initio 3D Modeling program will carry this secondary structure prediction algorithm in future.
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